Site    CDNA-Pos  Description   Allele1  JD-freq  ND-freq  RD-freq  Total-freq  Allele2  JD-freq  ND-freq  RD-freq  Total-freq  Protein-Pos  Codon1  Codon2  Amino1  Amino2
000155  00000     ------------  G        0.96     0.75     0.67     0.80        C        0.04     0.25     0.33     0.20        0000         ---     ---     ---     ---     
000201  00000     ------------  G        1.00     1.00     0.98     0.99        A        0.00     0.00     0.02     0.01        0000         ---     ---     ---     ---     
000872  00000     ------------  T        0.67     0.69     0.62     0.66        C        0.33     0.31     0.38     0.34        0000         ---     ---     ---     ---     
001218  00000     ------------  G        1.00     0.98     1.00     0.99        C        0.00     0.02     0.00     0.01        0000         ---     ---     ---     ---     
001671*
002038  00000     ------------  G        1.00     0.92     0.83     0.92        C        0.00     0.08     0.17     0.08        0000         ---     ---     ---     ---     
002085  00000     ------------  C        1.00     0.98     1.00     0.99        T        0.00     0.02     0.00     0.01        0000         ---     ---     ---     ---     
002115  00000     ------------  G        1.00     0.98     0.98     0.99        A        0.00     0.02     0.02     0.01        0000         ---     ---     ---     ---     
002233  00000     ------------  C        0.98     0.85     0.83     0.89        T        0.02     0.15     0.17     0.11        0000         ---     ---     ---     ---     
002818  00000     ------------  C        1.00     0.92     0.83     0.92        T        0.00     0.08     0.17     0.08        0000         ---     ---     ---     ---     
002868  00000     ------------  C        0.98     0.85     0.83     0.89        A        0.02     0.15     0.17     0.11        0000         ---     ---     ---     ---     
002994  00000     ------------  C        1.00     0.98     0.85     0.94        T        0.00     0.02     0.15     0.06        0000         ---     ---     ---     ---     
003027  00000     ------------  T        1.00     0.90     0.72     0.87        C        0.00     0.10     0.28     0.13        0000         ---     ---     ---     ---     
003092  00000     ------------  A        1.00     0.90     0.71     0.87        G        0.00     0.10     0.29     0.13        0000         ---     ---     ---     ---     
003208  00000     ------------  G        1.00     0.94     0.88     0.94        A        0.00     0.06     0.12     0.06        0000         ---     ---     ---     ---     

NOTE:
The following site(s) was observed to have three alleles. The frequency for each allele is given below:

Site    Allele1  RD-freq  RD-freq  RD-freq  Total-freq  Allele2  RD-freq  RD-freq  RD-freq  Total-freq  Allele3  RD-freq  RD-freq  RD-freq  Total-freq  
001671  -        0.00     0.08     0.15     0.08        GT       0.02     0.15     0.19     0.12        GTGT     0.04     0.00     0.00     0.01        GTGTGT   0.38     0.44     0.29     0.37        GTGTGTGT 0.02     0.00     0.00     0.01        GTGTGTGTGT0.10     0.08     0.02     0.07        GTGTGTGTGTGT0.42     0.21     0.25     0.29        GTGTGTGTGTGTGT0.00     0.04     0.08     0.04        GTGTGTGTGTGTGTGT0.02     0.00     0.02     0.01