Site    CDNA-Pos  Description   Allele1  JD-freq  ND-freq  RD-freq  Total-freq  Allele2  JD-freq  ND-freq  RD-freq  Total-freq  Protein-Pos  Codon1  Codon2  Amino1  Amino2
000434  00366     5' UTR        A        0.93     0.93     0.98     0.95        G        0.07     0.07     0.02     0.05        0000         ---     ---     ---     ---     
000537  00469     5' UTR        -        0.97     0.89     0.98     0.95        +        0.03     0.11     0.02     0.05        0000         ---     ---     ---     ---     
000637  00569     5' UTR        G        1.00     0.98     1.00     0.99        A        0.00     0.02     0.00     0.01        0000         ---     ---     ---     ---     
000670  00602     5' UTR        A        1.00     0.96     0.94     0.96        G        0.00     0.04     0.06     0.04        0000         ---     ---     ---     ---     
000752  00684     5' UTR        G        1.00     0.91     0.98     0.96        A        0.00     0.09     0.02     0.04        0000         ---     ---     ---     ---     
000797  00729     5' UTR        G        1.00     0.85     0.81     0.89        A        0.00     0.15     0.19     0.11        0000         ---     ---     ---     ---     
001472  01404     SYNON         C        0.96     0.92     0.98     0.95        T        0.04     0.08     0.02     0.05        0215         CAC     CAT     HIS(H)  HIS(H)  
001810  00000     ------------  C        0.98     0.97     0.93     0.96        T        0.02     0.03     0.07     0.04        0000         ---     ---     ---     ---     
002315  01729     NON-SYN       G        0.68     0.98     0.87     0.85        T        0.32     0.02     0.13     0.15        0324         GAT     TAT     ASP(D)  TYR(Y)  
002391  01805     NON-SYN       G        0.97     0.98     0.88     0.94        C        0.03     0.02     0.12     0.06        0349         CGA     CCA     ARG(R)  PRO(P)  
002425  00000     ------------  C        0.98     1.00     1.00     0.99        T        0.02     0.00     0.00     0.01        0000         ---     ---     ---     ---     
002457  00000     ------------  C        0.89     1.00     1.00     0.96        A        0.11     0.00     0.00     0.04        0000         ---     ---     ---     ---     
002563  01863     3' UTR        T        0.83     0.96     0.94     0.91        C        0.17     0.04     0.06     0.09        0000         ---     ---     ---     ---     
002769  00000     ------------  G        0.93     1.00     1.00     0.98        A        0.07     0.00     0.00     0.02        0000         ---     ---     ---     ---     
003099  00000     ------------  G        0.97     1.00     1.00     0.99        A        0.03     0.00     0.00     0.01        0000         ---     ---     ---     ---     
003580  00000     ------------  C        0.98     0.92     0.93     0.94        T        0.02     0.08     0.07     0.06        0000         ---     ---     ---     ---     
003659  00000     ------------  G        1.00     0.88     0.85     0.91        A        0.00     0.12     0.15     0.09        0000         ---     ---     ---     ---     
003691  00000     ------------  A        0.84     0.96     0.94     0.91        G        0.16     0.04     0.06     0.09        0000         ---     ---     ---     ---     
003710  00000     ------------  A        0.98     1.00     1.00     0.99        G        0.02     0.00     0.00     0.01        0000         ---     ---     ---     ---     
003727  00000     ------------  G        1.00     1.00     0.98     0.99        A        0.00     0.00     0.02     0.01        0000         ---     ---     ---     ---     
003835  00000     ------------  C        0.83     0.83     0.96     0.88        T        0.17     0.17     0.04     0.12        0000         ---     ---     ---     ---     
003950  00000     ------------  G        0.91     0.83     0.96     0.90        A        0.09     0.17     0.04     0.10        0000         ---     ---     ---     ---     
004024  00000     ------------  A        0.33     0.77     0.77     0.64        G        0.68     0.23     0.23     0.36        0000         ---     ---     ---     ---     

NOTE:
JD-freq: Jackson, MS frequency
ND-freq: North Karelia frequency
RD-freq: Rochester, MN frequency

NOTE:
Diallelic insertion/deletion polymorphisms are represented as:
+ : allele insertion
- : allele deletion

The + (inserted) allele for each site is listed below:
000537: GC