APOC2 Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of GeneSNPs

GGTTAGCGGT CAGGGGACAC ATAAGGGTAA AGGCAGGAGG CAAGAGGACT 50
GGCAGGGGGC TGCCCTGGGC CACCGGGAGC GACACAGGAT GAGCATGGAG 100
GGAAAGGGAG AAGGGGATTC TAGGGTCCCA GCCTACCCAA GTTGCCCTCT 150
GGTTCCACCT AGCATGCCAG CCAGAGGGCC CAGGAAGGAA CCCCGAGCCC 200 | var(194):[T:0.41] | var(198):[T:0.01]
CCCACCAAAG CTAAAGATGA GTCGCTGGAG CCTGGTGAGG GGCAGGATGA 250 | var(242):[A:0.01]
AGGAGCTGCT GGAGACAGTG GTGAACAGGA CCAGAGACGG GTGGCAATGG 300 | var(288):[T:0.01]
TTCTGGTGAG GGTGTGCTGG GCTGGGTGGT GGGAGGGGAC TCCTGGGTCT 350 | REPEAT
GAGGGAGGAG GGGCTGGGGC CTGGACCCCT GAGTCTCAGG GAGGAGGAAA 400
GGGTGGGAGT GGGGCTGTGA CCCCTAGGTC TGGGAGGAGT GGAGGGTTAG 450
AGCTGAGAGC AGGAACTCCT AGGTCACAGA GAGGAGCGGA TAAATGGGGC 500 | var(488):[A:0.01]
AGAGAACACC TGGGGAGAGC TGGGGCCTCC ACTGTGATGT CCTCTCTCCT 550
GTAGGAGCCC GAGCACCTTC CGGGGCTTCA TGCAGACCTA CTATGACGAC 600
CACCTGAGGG ACCTGGGTCC GCTCACCAAG GCCTGGTTCC TCGAATCCAA 650 | var(623):[G:0.37]
AGACAGCCTC TTGAAGAAGA CCCACAGCCT GTGCCCCAGG CTTGTCTGTG 700
GGGACAAGGA CCAGGGTTAA AATGTTCATA AAAGCCAGGT GTGGTTGTGG 750 | REPEAT
CGGGTGCCTG TAGTCCCAGC TACTCAGGAG GCTGAGGTAG GATGATGGCT 800
TGAGCCCAGG AGTTCGAGAC CAGCCTGGGC AACACAGCGA GATCTCTTGG 850 | var(850):[A:0.03]
G
GGTAAAACA AAAAGAAAAA AAAAAGTTCA TACTTCTCCA ATAAATAAAG 900 | var(853):[A:0.04]
TCTCACCTGT GTCCCTGTCT GGATCCTTCC CCAGTGTGGC CAGAAAAAAA 950
CCCACCCCAC TGCCTCCCAG GAATCAATGA GTAGAAGAGG TGACACCTGA 1000
TGGGGAAGGA AGAGTAGGGA GGTCGGGAAG GGTATCAAGG AATAACACCC 1050 | var(1042):[T:0.01]
TATTGTGGGC TTGCGGAGAA TGGGGGACTT CAAGGCGTGT CAGTTTCAGG 1100
AGGGTGAGGG CAGGAGCGTG GGTGGAGTCA GCAGGTCCCC ATGATGGCCC 1150
TCACTGAGAG CTTCGCCCTT GTCTCCTACA AGCTCTGACT CCATTCCCAG 1200
TGGGCACCCA GCACCTCCAA CCCCTCCACA GCCCCCAACC CAGCCTCTGT 1250
CGGAGGCGAA TTCTCAGAGT GAGGGTTCCC TGTCACTTGA GAGAAGGTTC 1300
CCTGTGACGT GACCTTGGGG GACGTCATTG CCCTTTCTGT CCCCACCCAC 1350 | var(1324):[A:0.01]
CCCCTCGGCA GTTCTGTTGG CCAGGACTTT GGCCTAGACA AAGGATGGGG 1400 | var(1357):[C:0.46]
GTTGTGGCTG TGGAGCGGAA GTGGGTCTCA ACCACTATAA AGCCTCTCTG 1450 | var(1442):[T:0.46] | Exon 1 | UTR
TGCCCGTCCG GAGCTGGTGA GGACAGCCTG CCAGAGTCTG
GTAAGAAAGG 1500
GACTCAGGGT GCGGGGACAG GGGGGCGTCA GCAGGGAGAG GGCAAAGATC 1550
GATAAAGCAG GAATTTTAAG AGGCACAATA TTAGAAGCCC GTGTTGGAAC 1600
CATGACTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 1650
AGAGAGAGAG AGAGGGAGAT GGAGTCTCGC TATGTAGCCC AGGCTAGACT 1700 | REPEAT
CAAACTCCTG GGCTCAAGCA ATCCTCCTGC CTCAGCCTCC CCAGTAGCTG 1750
GGACTACAGG TGCACCACCA CACTCCACAA ATCACAGAAT TTAGAACTGT 1800
AGACTATTTG AGCTTCTGCT TAGAGTTAGG GTGGCTGAGG TGGGGAGGAT 1850 | REPEAT
CCCTTGAGCC CAGGAGTTTG AGGATGCAGT GAGCTGTGAT CTTGCCACCG 1900 | var(1851):[T:0.01]
TGTTCCAGCC TGGGTGACAG AGAAACCCCA TTTCTAAAAA AGAGAAAGAA 1950
AAAGGGATAG GTACAATGGC TCATGCCTGT AATCCCAGCA CTCTGGGAGG 2000 | REPEAT
CCGAGGCGGG TGGATCACTT GAGGTCAGGA GTTCGACACC AGCCTTACCA 2050
GCATGGTGAA ACCGCATCTA TACTAAAAAT ACAAAAATTG GCCGGGTGTG 2100 | var(2090):[A:0.01]
GTAGCATATG CCTGTAATCC CAGCTATTCC AGAGGCTGAG ACAGGAGAAT 2150
TGCTTGAACC CAGGAAGCGG AGGTTGCAGT GAGCCCAGAT CGTGCCACTG 2200 | var(2191):[T:0.46]
TACTCTAGCC TGGGTGACAG AGCAAGACTC AGTCTTGGCG GAAAAAAAGA 2250
ATGAAAAAAT TTAAAAAACT AAAAAAGAAC TGTAGGCTGG GCGTGGTGGC 2300 | REPEAT
TTACACTTGT AATCCAAACG CTTTGGGAGG CCAAGGCAAA CGGATCACTT 2350
GATGTCAGGA GTTGGAGACC AGCCTGGCCA ACATGGTGAA ACCCCGTCTC 2400
TACTAAAAAT ACAAAAATTA GACAGGCATG GTGGTGCATG CTTGTATTTC 2450 | var(2410):[C:0.09]
CAGTTACTCA GGAGGCTGAG GCAGGAGAAT CGCTCGAACC CGGAAGACAG 2500 | var(2486):[A:0.18]
AGGTTGCGGT GAGCCAAAAT TGCGCCATCG CACTCCAGCC TGGGCGAGAG 2550
AACAAGACCT TGTCTTGGAA AAAAAAAAAG AATTGTAGAC CATTTGCTTG 2600 | var(2566):[C:0.49]
TGTTCTTTCT CCGGGGATCA GATCTCACCC TCTTTCTGCC GTACTTCCTC 2650
ATCTCCTACG TGTGGATGAT GATATTGTGC CCTGTGCATG TTCTTCGTCA 2700
CCAAAAGTGC CTCTCTCATA GAGCAGGTGA GAACTCAGTG AGGAGATGCA 2750
GGGACATGAG GTCTGACTTA GGGCAGAGCC CTAAGGTAAC ACATTTGATC 2800
TACTGTAGGT CCTTAATGGT GTCTGCAGAG CACCTCCCTG CACTGACTCA 2850
GCCTTAGCAA AGGGCAGAGG CTTTGCTGTG TTCCCTGCTG GGCCCAGAAC 2900
TGTTTAGGTG CTCAAGAAAG CCTTCTAGGC TGGGCTCAGT GGCTCACACC 2950 | REPEAT | var(2935):[G:0.07]
TGTACTCCCA GCACCCTGGG GAGGCCGAGA TGGGAGGATC GCTTGAGCCC 3000
AGGAGTTCCA GACCAGCCTG GGCAACAAAA CAAGTCTCCC ATCTCTACAA 3050 | var(3010):[G:0.08] | var(3030):[G:0.48]
AAGAATAAAA ATTAGCAGCT GGGCATGGTG GCTCACGCCT GTAATTCCAG 3100 | REPEAT | var(3086):[T:0.44]
CACTTTGGGA GGCCAAGGCA GGCAAATCAC TTGAGGTTAG GAGTTCAAGA 3150
CCAGCCTGGC CAACATGGTG AAACCCCATC TCTACTAAAA ATACAAAAAT 3200
CAGGTGGGGC ACAGTGGCTC AAGCCTGTAA TCCTAGCACT TTGGGAGGCC 3250 | REPEAT
AAGGTGGGCG GATCACGAGG TCAGAAGTTC GAGACCAGCC TGGCCAGCAT 3300 | var(3259):[T:0.01] | var(3289):[G:0.01]
GGTGAAACCC CATCTCTACT AAAAATACAA AATATTAGCC GGGCATGGTG 3350 | var(3348):[A:0.08]
GCAGGTGCTT GTGATTCCAG CTCCTTGGGA GGCTGAGGCA GAAGAATTGC 3400
TAGAACCCTG GAGGCAGAGG TTGCAGTGAG CCGAGAACAC GCCACTGCAC 3450
TCCAGCCTGG GTGACAGAGC GAGACTCCAT CTCAAAAAAT ACGAAAACAA 3500 | var(3459):[C:0.01]
AAATCAGCCG GGTGGTGGCG GGTGCCTGTA ATCCCAGCTA CTGGGGAGGC 3550 | REPEAT
TGAGGCAGGA GAATTGCTTG AACCTGGGAG GTGGGGGTTG CAGTGAGCCA 3600 | var(3600):[G:0.49]
A
GATTGCACC ACTGCACTCC AGCCTGGGCA ACAGAGTGAG ATTCCATCTC 3650
AAAAAAGAAA AAAATAATAA TTAAAATGTT AAAATCAGGA GTAGAATCAC 3700 | var(3692):[G:0.01]
AGAATGTTGG AAAGTGAGGC CCAAGAAGGG GGCTGTGTCC AAGTCCATGC 3750
ATGGGAAACT TGACTGGGAC ACCGAGCACA CACAGAGCAG GATCTCAGTC 3800 | var(3778):[T:0.44]
CCCCCCACCA GAGTGGGGCG TGACCACAGG AACAGCCGCC TCCAGTCAGC 3850 | var(3806):[G:0.02] | var(3814):[G:0.23] | var(3820):[A:0.03]
CTGCCACATG ACACCCCCTC AATGTTCCAG GTCTCTGGAC ACTATGGGCA 3900 | Exon 2 | UTR
                                                M  G   2
CACGACTCCT CCCAGCTCTG TTTCTTGTCC TCCTGGTATT GGGATTTGGT 3950
T  R  L  L   P  A  L   F  L  V   L  L  V  L   G  F     18
GAGTGTGGGC TTCCGGGGAG GGAAGCCTTG GGGAGGGGAA TGAGCTCCAA 4000
GCATCTTCCC AGCCCAGGCC CTTCTTACCT CTGCCTCTGC CCTCTCCTCT 4050
TCTTCCTTCC TCCTTTCCCC CTGCTGCAGC CCCACGGGCT CTCCTGACAC 4100
ACTCTCCCCC TGCAGAGGTC CAGGGGACCC AACAGCCCCA GCAAGATGAG 4150 | Exon 3
                E  V   Q  G  T   Q  Q  P  Q   Q  D  E  30
ATGCCTAGCC CGACCTTCCT CACCCAGGTG AAGGAATCTC TCTCCAGTTA 4200
 M  P  S   P  T  F  L   T  Q  V   K  E  S   L  S  S  Y 47
CTGGGAGTCA GCAAAGACAG CCGCCCAGAA CCTGTACGAG AAGACATACC 4250
  W  E  S   A  K  T   A  A  Q  N   L  Y  E   K  T  Y   63
TGCCCGCTGT AGATGAGAAA CTCAGGTAGC ACCTGCCCCT GGAGAAATGG 4300
L  P  A  V   D  E  K   L  R                            72
GGTCTGGCCC ATACCACCGA CTGCATCCAG GACCCAGAAG TTCAGGCCCC 4350 | REPEAT
AGCCCCTCCT CCCTCAGACC CAGGAGTCCA GGCCTCAGCC CCTCCTCCCT 4400
CAGACCCAGG AGTCCAGGCC CCCAGCCCGT CCTCCCTCAG ACCCAGGAGT 4450
CCAGGCCCCC AGCCCCTCCT CCCTCAGACC CAGGAGTCCA GGTCCCCAGA 4500 | var(4493):[T:0.49]
CCCTCCTCCC TCAGACCCAG GAGTCCAGGC CCCCAGCCCC TCCTCCCTCT 4550
AACCATCTGT GCTTTCTCCC CAGGGACTTG TACAGCAAAA GCACAGCAGC 4600 | Exon 4
                           D  L   Y  S  K   S  T  A  A 81
CATGAGCACT TACACAGGCA TTTTTACTGA CCAAGTTCTT TCTGTGCTGA 4650
  M  S  T   Y  T  G   I  F  T  D   Q  V  L   S  V  L   97
AGGGAGAGGA GTAACAGCCA GACCCCCCAT CAGTGGACAA GGGGAGAGTC 4700 | UTR
K  G  E  E                                             101
CCCTACTCCC CTGATCCCCC AGGTTCAGAC TGAGCTCCCC CTTCCCAGTA 4750
GCTCTTGCAT CCTCCTCCCA ACTCTAGCCT GAATTCTTTT CAATAAAAAA 4800
TACAATT
CAA GTTGCTTCTC ATGGATGGCA CTGCTTTTCT GAGGACTCAA 4850
GGTGCCAAGA TGGAGGGGCT GACTCAGTCC AGCCAACATT TAATGAGCAC 4900 | REPEAT
CTACTTTATG TATGGAGCTC TAACCCATGG GTCCATGGGA ATAAAGCAGT 4950
GAATAGTAAC AATAAATAAT CGTAACAGCA ATTAGAGACT AATCTTTATT 5000 | var(4971):[T:0.35]
GAAGTCCGGC TTTCTCTCTT TTATTTTTTT ATTTTTTGAG ACAGGGTTTC 5050 | var(5004):[A:0.10] | REPEAT
ACTCTGTCAC CCAGGCTGGA CAGCAGTGGT GCAATCTCGG CTCACTGCAC 5100
CCTCCGCCTC CCAGGTTCCA GCGATTCTGT GTGCCTCAGC CTCTGGAGTA 5150
GCTGGGATTA TGGGCATGTG CCACTGTGCA CGGCTAATGT TTGTATTTTT 5200
AGTAGGGTTT TGCCAGTTGG CTAGGCTGGT CTCAAACTTC TGACCTCAAG 5250
TGATCCACCC GCCTCAGCCT CCCAAAGTAC TGGGGTGACA GGCATGAGCC 5300
ACCGCGCCAT GCCAAAATCC AGCCTTCTCA TTTGTAAAAT AACAAATCAT 5350 | var(5303):[T:0.49] | var(5310):[G:0.48] | var(5324):[T:0.48]
AGACACAGCT AGTCCACAGT GGCCTCTGAC AGTCTCCAGT TGTTAACGGT 5400 | REPEAT | var(5398):[A:0.28]
GAATGGTGTC CAGGTTTTTG GCGTCCTGAA CAAAGAACTG GACAAAACGC 5450
ACAAACAAAG CAAGGAAGGA ATGAAGGGAT TTATTGAAAA CGAACATACA 5500
CTAAACAGTG TGGGAGCGGG CCCAAGCATA TGGGTTCAAA AGCCCTGTTA 5550 | var(5512):[A:0.01]
CAGAATTTTT GGGAGTTTAA ATTCCCCCTA GAGGATTCCC CTTCCACTGG 5600
TTACTTCTGG TACACCCTAT GTAAATGGAG AGGATGAAGA AAAGTTACAA 5650
AGTCATTTAT GGCCTACCGG AGAGGATGTT TCCTGTTATA GCTGAAGTGA 5700
ATTGGCCTTA TGTTCCCTGC CTCCCTATTT TCCTGCCTTA CAGTTGCTGG 5750
ACTGACACAT TTTTTATTTT ATTTATTTTG TTTTGAGATA AGGTCTTGCT 5800 | REPEAT
CTGTCGCCCA GGCTGAAGTG CAGTGGTGAG ATCTTGGCTT ACTGTAGCCT 5850 | var(5815):[A:0.49]
TGACCTTTTG GGCTCAAGAG ATCCTCCCAT CTCAGCCTCC CAAGTAGTTG 5900
GGACTAGGGA TGCCCACTGC CACACCTGGC TAATTTTTTG TATTTTTAGT 5950 | var(5922):[G:0.12]
AGAGACGGGG TTTCGTCAAG TTGCCTAGGC TAGTCTCCAA TTCCTGGGCT 6000
CAAGCGATCT GCCCACCTTG CCCTTCCAAA GTGTTGGGAT TACGGGTGTG 6050 | var(6037):[A:0.49]
AACCACCGCA CCAGGCCTGG GCTGACACTT TAAACGTGCC ATTGCAATCA 6100
GTGTATAATG GTCCCGTGGC AGAGGGAGAA TGGTGCCCAA GTCAGTACTT 6150
CTTGGCTGGG ACCCAAGAAG ACAAACCTCT AGGGCCGGCG TGGTGGCTCA 6200 | REPEAT
CGCCTGTAAT CCCAGCACTT TGGTTGGCTG AGGTGGGCAG ATCATCTGAG 6250
GTCAGGAGTT CAAGACCAGC CTGGCCAACA TGGTGAAACC TTGTCTCTAA 6300
TAAAAACACA AAAATTAGCT AGGGGTGGCC CGCGCCTGTA ATCCCAGTTA 6350
CCTGGAGGCT GAGGCAGGAG AATTGCTTGT ACCCTGGAGG CGGAGATAGT 6400 | var(6395):[A:0.48]
GCCACTGCAC TCCAGCCTGG GCAGCAGAGT GAGACTCC