Site    CDNA-Pos  Description   Allele1  JD-freq  ND-freq  RD-freq  Total-freq  Allele2  JD-freq  ND-freq  RD-freq  Total-freq  Protein-Pos  Codon1  Codon2  Amino1  Amino2
000073  00000     ------------  C        0.96     1.00     1.00     0.99        T        0.04     0.00     0.00     0.01        0000         ---     ---     ---     ---     
000308  00000     ------------  C        0.98     1.00     1.00     0.99        T        0.02     0.00     0.00     0.01        0000         ---     ---     ---     ---     
000471  00000     ------------  A        0.96     1.00     1.00     0.99        G        0.04     0.00     0.00     0.01        0000         ---     ---     ---     ---     
000545  00000     ------------  C        0.98     1.00     1.00     0.99        T        0.02     0.00     0.00     0.01        0000         ---     ---     ---     ---     
000560  00000     ------------  A        0.71     0.88     0.73     0.77        T        0.29     0.12     0.27     0.23        0000         ---     ---     ---     ---     
000624  00000     ------------  T        1.00     0.98     0.75     0.91        C        0.00     0.02     0.25     0.09        0000         ---     ---     ---     ---     
000832  00000     ------------  G        0.77     0.46     0.56     0.60        T        0.23     0.54     0.44     0.40        0000         ---     ---     ---     ---     
001163  00000     ------------  G        0.79     0.67     0.65     0.70        C        0.21     0.33     0.35     0.30        0000         ---     ---     ---     ---     
001522  00000     ------------  G        1.00     0.96     1.00     0.99        A        0.00     0.04     0.00     0.01        0000         ---     ---     ---     ---     
001575  00000     ------------  C        1.00     1.00     0.96     0.99        T        0.00     0.00     0.04     0.01        0000         ---     ---     ---     ---     
001998  00000     ------------  G        1.00     0.77     0.92     0.90        A        0.00     0.23     0.08     0.10        0000         ---     ---     ---     ---     
002440  00000     ------------  G        0.48     0.60     0.67     0.58        A        0.52     0.40     0.33     0.42        0000         ---     ---     ---     ---     
002907  00000     ------------  T        1.00     0.98     1.00     0.99        G        0.00     0.02     0.00     0.01        0000         ---     ---     ---     ---     
003106  00195     NON-SYN       T        1.00     1.00     0.98     0.99        C        0.00     0.00     0.02     0.01        0046         CTG     CCG     LEU(L)  PRO(P)  
003673  00000     ------------  C        0.98     1.00     1.00     0.99        G        0.02     0.00     0.00     0.01        0000         ---     ---     ---     ---     
003937  00446     NON-SYN       T        0.90     0.77     0.88     0.85        C        0.10     0.23     0.12     0.15        0130         TGC     CGC     CYS(C)  ARG(R)  
004036  00545     NON-SYN       C        0.96     1.00     1.00     0.99        T        0.04     0.00     0.00     0.01        0163         CGT     TGT     ARG(R)  CYS(C)  
004075  00584     NON-SYN       C        0.96     0.96     0.81     0.91        T        0.04     0.04     0.19     0.09        0176         CGC     TGC     ARG(R)  CYS(C)  
005229	*
005361  00000     ------------  T        0.98     0.83     0.96     0.92        C        0.02     0.17     0.04     0.08        0000         ---     ---     ---     ---     

NOTE:
JD-freq: Jackson, MS frequency
ND-freq: North Karelia frequency
RD-freq: Rochester, MN frequency

NOTE:
Diallelic insertion/deletion polymorphisms are represented as:
+ : allele insertion
- : allele deletion

The + (inserted) allele for each site is listed below:
005230: G