LDLR Color FASTA
The longest form of insertion/deletion sites is shown in the FASTA sequence and contain a '-' as the alternate allele in the variation tag.
*Display courtesy of
GeneSNPs
GCTTTAAGTT GAATCTTTAA AC
T
T
A
T
C
T
T
T
A
T
T
T
T
T
G
A
G
A
C
A
C
A
G
T
C
T
C
A
50 |
REPEAT
C
T
C
T
G
T
C
G
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
G
T
G
G
T
A
C
A
A
C
C
A
C
A
G
C
T
C
A
G
T
G
C
A
G
C
100
G
T
T
G
A
C
C
T
C
C
T
G
G
G
C
T
C
A
A
G
C
C
A
T
C
C
T
C
C
C
G
C
C
T
C
A
G
C
C
T
C
C
C
G
A
G
T
A
G
C
150
T
G
G
G
A
C
T
A
C
A
G
G
C
G
C
A
C
A
C
A
A
C
C
A
T
G
T
C
C
A
G
C
T
T
A
T
T
T
T
T
G
T
A
T
T
T
T
T
T
G
200 |
var(163):[T:0.01]
|
var(172):[A:0.01]
T
A
G
A
G
A
C
A
G
G
G
T
C
C
C
A
C
T
G
T
G
T
T
G
C
C
C
T
G
G
C
T
T
G
T
T
C
T
G
A
A
C
T
C
C
T
A
G
G
C
250
T
C
A
A
G
T
G
A
T
C
C
C
C
C
C
G
C
C
T
C
A
C
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
A
T
300
G
A
G
C
C
A
C
C
A
C
A
T
C
C
A
G
ACTT CACTTTTTTG TTTAATGTCG CAAATGGCAT
350
AAGGAATGGG ATTCAATGGG GACACATTTA TAAA
C
GTTGC AGCAGCTCCT
400 |
var(385):[T:0.18]
AGAACTTGCC TATCCTTGTA AACTTCTCTA GGTGATTGCT AATTAC
T
T
C
T
450 |
REPEAT
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
A
C
G
G
A
G
T
C
T
C
A
C
T
C
T
G
T
C
G
C
C
C
A
G
G
C
T
G
G
500
A
G
T
A
C
A
G
T
G
G
C
G
C
A
A
T
C
T
C
G
T
C
T
C
A
C
T
G
C
A
A
A
C
T
C
C
A
C
C
T
C
C
C
G
G
G
T
T
C
A
550
C
G
C
C
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
C
G
A
G
T
A
G
C
T
G
G
G
A
C
T
A
C
A
G
G
C
A
C
C
C
G
600
C
C
A
C
C
A
C
G
C
C
C
G
G
C
T
A
A
T
T
T
T
T
T
G
T
A
T
T
T
T
T
T
T
T
T
A
G
T
A
G
A
G
G
T
G
G
G
G
T
T
650
T
C
A
C
T
G
T
G
T
T
A
T
C
C
A
G
G
A
T
G
G
T
C
T
T
G
A
T
C
T
C
C
T
G
A
C
C
T
C
G
T
G
A
T
C
C
A
C
C
T
700 |
var(689):[T:0.01]
|
var(700):[C:0.20]
G
C
C
T
C
A
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
T
G
A
G
C
C
A
C
C
A
T
G
C
C
C
A
750
G
C
C
CGCTAAT TATTTCAATT TGACCTTGAC ACTGAGCCTG CCAAGTAGGT
800
TCAAGCATTT TGATGGCCCC TTTACAGGTT GGGAAAGCTA ATTTATCTGT
850
CCAAGGCCGA ATTCTGAAAC TGAGTCTTAA
C
TGCCAAAAA TTCTTATCAT
900 |
var(881):[A:0.07]
CAATTTCTTC TTCTG
G
G
T
T
G
G
G
C
A
C
A
G
T
G
G
C
T
C
A
T
G
C
C
T
G
T
A
A
A
G
C
C
A
G
C
950 |
REPEAT
A
A
T
T
T
G
A
G
A
G
G
C
A
T
C
A
T
G
A
T
G
C
A
A
G
A
G
G
A
A
G
A
G
G
A
T
T
G
A
G
T
G
A
A
G
C
T
A
G
G
1000 |
var(953):[G:0.02]
|
var(978):[A:0.07]
A
G
T
T
T
G
G
G
A
C
C
A
G
C
C
T
G
G
G
C
A
A
C
A
T
A
G
T
G
A
G
A
C
C
C
C
A
T
C
T
A
T
A
A
A
A
A
A
A
A
1050
A
T
T
A
A
A
A
A
T
T
A
G
T
T
G
G
G
C
A
T
G
G
T
G
G
T
G
C
A
C
T
C
C
T
G
T
G
G
T
C
C
T
A
G
C
T
A
T
T
C
1100
A
G
G
A
G
G
C
T
G
A
G
G
T
G
G
G
A
G
G
A
T
T
C
C
T
T
G
A
G
C
C
C
A
G
G
G
T
T
G
A
C
G
C
T
G
C
A
G
A
G
1150 |
var(1141):[T:0.01]
A
G
C
T
G
T
G
A
T
C
A
C
G
C
C
A
C
T
G
C
A
G
T
C
C
A
G
C
C
T
G
A
G
T
G
A
C
A
G
C TGGAAATAAT
1200
GATAAATAAA TAATAAATAA TTATTTAAAA AATTATAATA AAAATAATTA
1250
AAAAATTATT TTCCCTGATT AATCTTTTTT TTTGTCCTTC TGAGAGTTCA
1300
ATTTGTCCCT TTTCTGCCTG GTCTCCTAGG TTTCCCTAAA ATCCTGCTGA
1350
GAGGTTAGCA CTGCCTGCCA AAGTCAGTTT GCAAAATCCC AGAGAAATCC
1400
AGCTTATTCC TGGGGGAACC GCCAAGACTG CCCAGCCCTG TGTGGGGTTC
1450
AGGCAAGTTT CTCACATGTG CCTTTTTGGC AAGAGGCCTC TGGCAA
C
CCC
1500 |
var(1497):[T:0.01]
ATGAGTCCCC AAAGAGACTC AATTCTAAAA GTTGGTCTCC ACCAGCTCTC
1550
TGTGGCTTAG GGGTTCAAGT TCAACTGTGA AAGCCCTGTT TTGTTTTGAT
1600
TTTGCTTTGA GGGAGAGGAA ACCGCCCTTC TGTTTGTTCA ACTCCTTCTC
1650
CTAAGGGGAG AAATCAATAT TTACGTCCAG ACTCCAGGTA TCC
G
TACAAT
1700 |
var(1694):[A:0.01]
TGATTTTTCA GATGTTTATA CTCAGCCAAA GG
C
GGGATCC CACAAAACAA
1750 |
var(1733):[T:0.01]
AAAATATTTT TTTGGCTGTA CTTTTGTGAA GATTTTATTT AAATTCCTGA
1800
TTGATCAGTG TCTATTAGGT GATTTGGAAT AACAATGTAA AAACAATATA
1850
CAACGAAAGG AAGCTAAAAA TCTATACACA ATTCCTAGAA AGGAAAAGGC
1900
AAATATAGAA AGTGGCGGAA GTTCCCAACA TTTTTAGTGT TTTCCTTTTG
1950
AGGCAGAGAG GACAATGGCA TTAGGCTATT GGAGGATCTT GAAAGGCTGT
2000
TGTTATCCTT CTGTGGACAA CAACAGCAAA ATGTTAACAG TTAAACATCG
2050
AGAAATTTCA GGAGGATCTT TCAGAAGATG CGTTTCCAAT TTTGAGGGGG
2100
CGTCAGCTCT TCACCGGAGA CCCAAATACA ACAAATCAAG TCGCCTGCCC
2150
TGGC
G
ACACT TTCGAAGGAC TGGAGTGGGA ATCAGAGCTT CACGGGTTAA
2200 |
var(2155):[T:0.01]
AAAGC
C
GATG TCACATCGGC CGTTCGAAAC TCCTCCTCTT GCAGTGAGGT
2250 |
var(2206):[T:0.01]
GAAGACATTT GAAAATCACC CCACTGCAAA CTCCTCCCCC TGCTAGAAAC
2300
CTCACATTGA AATGCTGTAA ATGACGTGG
G
C
C
C
C
G
A
G
T
G
C
A
A
T
C
G
C
G
G
G
A
2350 | Exon 1 |
UTR
A
G
C
C
A
G
G
G
T
T
T
C
C
A
G
C
T
A
G
G
A
C
A
C
A
G
C
A
G
G
T
C
G
T
G
A
T
C
C
G
G
G
T
C
G
G
G
A
C
A
2400
C
T
G
C
C
T
G
G
C
A
G
A
G
G
C
T
G
C
G
A
G
C
A
T
G
G
G
G
C
C
C
T
G
G
G
G
C
T
G
G
A
A
A
T
T
G
C
G
C
T
2450
M G P W G W K L R 9
G
G
A
C
C
G
T
C
G
C
C
T
T
G
C
T
C
C
T
C
G
C
C
G
C
G
G
C
G
G
G
G
A
C
T
G
C
A
G
G TAAGGCTTGC
2500
W T V A L L L A A A G T A 22
TCCAGG
C
GCC AGAATAGGTT GAGAGGGAGC CCCCGGGGGG CCCTTGGGAA
2550 |
var(2507):[A:0.01]
TTTATTTTTT TGGGTACAAA TAATCACTCC ATCCCTGGGA GACTTGTGGG
2600
GTAATGGCAC GGGGTCCTTC CCAAACGGCT GGAGGGGGCG CTGGAGGGGG
2650
GCGCTGAGGG GAGCGCGAGG GT
C
GGGAGGA GTCTGAGGGA TTTAAGGGAA
2700 |
var(2673):[G:0.01]
ACGGGGCACC GCTGTCCCCC AAGTCTCCAC AGGGTGAGGG ACCGCA
T
C
T
T
2750 |
REPEAT
C
T
T
T
G
A
G
A
C
G
G
A
G
T
C
T
A
G
C
T
C
T
G
T
C
G
C
C
C
A
G
G
A
T
G
G
A
G
T
G
C
A
G
T
G
G
C
A
C
G
2800 |
var(2777):[T:0.01]
A
T
C
T
C
A
G
C
T
C
A
C
T
G
C
A
A
C
C
T
C
C
G
C
C
T
C
C
C
G
G
G
T
T
T
A
A
G
C
G
A
G
T
C
T
C
C
T
C
T
2850
C
T
C
A
G
C
C
T
C
C
C
G
A
A
T
A
G
C
T
G
G
G
A
T
T
A
C
A
G
G
C
G
C
C
C
A
A
C
C
A
C
C
A
C
G
C
C
C
G
C
2900
C
T
A
A
T
T
T
T
T
G
T
A
T
T
T
T
T
A
G
T
A
G
A
G
A
C
G
G
G
T
T
T
T
C
A
C
C
A
T
T
T
T
G
G
C
C
A
G
G
C
2950
T
G
G
T
C
T
C
G
A
A
C
C
C
C
G
A
C
C
T
C
A
G
G
T
G
A
T
C
T
G
C
C
C
A
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
C
3000 |
var(2951):[C:0.01]
A
G
G
C
G
T
C
A
G
C
C
A
C
C
G
C
G
C
C
C
G
G
C
C
GGGACC CTCTCTTCTA ACTCGGAGCT
3050 |
var(3004):[T:0.06]
GGGTGTGGGG ACCTCCAGTC CTAAAACAAG GGATCACTCC CACCCCCGCC
3100
TTAAGTCCTT CTGGGGGCGA GGGCGACTGG AGACCCGGAT GTCCAGCCTG
3150
GAGGTCACCG CGGGCTCAGG GGTCCCGATC CGCTTTGCGC GACCCCAGGG
3200
CGCCACTGCC ATCCTGAGTT GGGTGCAGTC CCGGGATTCC GCCGCGTGCT
3250
CCGGGACGGG GGCCACCCCC TCCCGCCCCT GCCCCCGCCC CTTTGGCCCG
3300
CCCCCCGAAT TCCATTGGGT GTAGTCCGAA CAGGCCACCC TCGAGCCACT
3350
CCCCTTGTCC AATGTGAGGC GGTGGAGGCG GAGGCGGGCG TCGGGAGGAC
3400
GGGGCTTGTG TACGAGCGGG GCGGGGCTGG CGCGGAAGTC TGAGCCTCAC
3450
CTTGTCCGGG GCGAGGCGG
A
T
G
C
A
G
G
G
G
A
G
G
C
C
T
G
G
C
G
T
T
C
C
T
C
C
G
C
G
G
T
3500 |
NOT SCANNED
T
C
C
T
G
T
C
A
C
A
A
A
G
G
C
G
A
C
G
A
C
A
A
G
T
C
C
C
G
G
G
T
C
C
C
C
G
G
A
G
C
C
G
C
C
T
C
C
G
C
3550
G
A
C
A
T
A
C
A
C
G
A
G
T
C
G
C
C
C
T
C
C
G
T
T
A
T
C
C
T
G
G
G
CCCTCCTG GCGAAGTCCC
3600
CGGTTTCCGC TGTGCTCTGT GGCGACACCT CCGTCCCCAC CTTGTCCTGG
3650
GGGGCGCCCT CGCCCCACCA GCCCCGATCA AGTTCACAGA GGGCCCCCGG
3700
CCACCCTCAA GGCCTCGGTT CCTTACGAGG TTGAAACGTT GCCTCAGAAT
3750
CTCCCCGCCC CTCCTTGGTC TGCAGCCGAG ATCTTCAGCC ACGGTGGGGC
3800
AGCTATCCCC CGGGACCGAC CCCCTGGGGT GGCCTCGCTT CTTCAGAGGC
3850
TGTGAATGGC TTCGGTTCAG CTGTCCAAGC GGCGATTTTT CCTCTGGGTG
3900
AAATGGATTA GATTTTAGAT TTCCACAAGA GGCTGGTTAG TGCATGATCC
3950
TGAGTTAGAG CTTTTTAGGT GGCTTTAAAT TAGTTGCAGA GAGACAGCCT
4000
CGCCCTAGAC AACAGCTACA TGGCCCTTTC CCTCCTGAGA ACCAGCCTAG
4050
CCTAGAAAAG GATTGGGATT GCCTGATGAA CACAAGGATT GCAGGAAACT
4100
TTTTTTTTAA TTGGCAAGGG GGTTGGCTTT GACTGGATGG AGAGCTTTGA
4150
ACTGCCTTGA AATTCACGCT GTAACTAACA CACCAGTTTC CTCTGGGAGG
4200
CCAGAGAGGG AGGGAGGGTG TAATGAAATA CGGATGATTG TTCTTTTATT
4250
TTTATTTACT TATTT
A
T
T
T
T
T
T
A
A
C
T
T
T
T
T
G
T
A
G
A
G
A
T
G
A
G
G
T
C
T
C
G
C
T
T
4300 |
REPEAT
G
G
T
T
G
C
T
C
A
G
G
C
T
G
G
T
C
T
T
G
A
A
C
T
C
C
T
G
G
C
C
T
C
A
A
G
C
G
A
T
C
C
T
C
C
T
A
C
C
T
4350
C
A
G
C
C
T
C
C
C
A
A
A
G
T
G
T
T
G
G
G
A
T
T
A
C
A
G
G
A
G
T
G
A
G
C
C
A
C
C
G
C
G
C
C
C
CACCG
4400
GGGATGATGA TGATTGCAAA CATTCTGCCA CTCAGTTTTA CAAAAGAAAG
4450
AGAGGCACTG GATTAATGTG TATCTCACTC ACCAATCAAC CTCTTCCTTA
4500
AGA
G
AAAATG TTAAGGAAGT CTTAGGCAAG GCCTTGTTTG TTCATCACTT
4550 |
var(4504):[T:0.13]
TAGTTTCTCT CTCCCGGGAT GGCTGAGAAT GTGATGTTTC CTCTGTTGTC
4600
AAGGAGACTA CACCCCTGAT GTTTTCCTCC AGACTTCTGA GAGCTGGTGT
4650
GTGTTTC
T
AG CACTTTCTAG CTGCACCACC TCACGCTGTA GCTGGCTTCA
4700 |
var(4658):[A:0.01]
AGGCATATCC AGG
G
GGGAGT TTCTTGTCCA TTTCCTTTAC AAAGGGAAGT
4750 |
var(4714):[C:0.02]
TGTTGGAATC TGAACC
G
CAA GCCTTCACTT AGACCAAAAT CAGGCAACAG
4800 |
var(4767):[A:0.02]
CGGTGAGCGC AGCTCCAAAC GTGTCAATGA CTCACCCAAA TTTGAGTAAG
4850
GGAGTTGGCT GCTTTAACGA GCCGCAGGGT GATTCCCTTG TCATTTCCGG
4900
AAATACCTAT CTTCCAGGGA ACACTGGGAA AAAACAGGGA GACCTTTGTT
4950
GAGACAGAAA ACCTGTAGGG GAATTCTGTT CCTCATTCCT GCTCTTATCT
5000
GTAGACTTCC TCCCTGATAA GATCCAATTC TAGATGGGTC GGTTGCTCCT
5050
TGCTTTGATG GGTGCTTTGA TGGGCTTTAT TATTATTATT ATTATTATTA
5100
TTATTATTTT GATGGGCTTT TTGATGTCCC TTTTCCTTCC ACACTCTGTC
5150
CCAACTGTCA AGCAAATAGC CTTTTGTTGC TAAGAGACTG CAGATGTAAC
5200
CGACCAGCAG CAAACAGTGA GTCAGGCTCT CTCTTC
C
GGA AGCAAAATCA
5250 |
var(5237):[T:0.01]
ATTGCTGAGA TCACTCTGGG GAAAATACCC ACCTTATTTG GAAAGAAGCA
5300
CTGATCAATT GATGTCTA
T
T
T
T
T
T
T
T
T
T
T
T
T
T
G
A
G
T
T
G
G
A
G
T
C
T
C
G
C
C
C
T
5350 |
REPEAT
G
T
C
A
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
A
T
G
G
C
A
T
A
A
T
C
T
C
G
C
C
T
C
A
C
T
G
C
A
A
T
C
C
C
C
5400
G
C
C
T
C
C
C
G
G
G
T
T
C
C
A
G
C
A
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
T
G
A
G
T
A
G
C
T
G
G
A
5450
A
T
T
A
T
A
G
G
C
G
C
C
T
G
C
C
A
C
A
A
C
A
C
C
C
G
G
C
T
A
A
T
T
T
T
T
G
T
A
T
T
T
G
T
A
G
T
A
G
A
5500
G
A
T
G
G
G
G
T
T
T
C
A
C
C
A
C
G
T
T
G
G
C
C
A
G
G
C
T
G
G
T
C
T
C
G
A
A
C
T
C
C
T
G
A
C
C
T
C
G
T
5550
G
A
T
C
C
A
C
C
C
G
C
C
T
C
A
G
C
C
T
C
C
C
A
A
A
G
T
C
C
A
A
G
G
A
T
T
G
C
A
G
G
C
G
T
G
A
C
C
C
A
5600
C
T
G
T
G
C
C
AGC C
A
ATCAATTG ATTTCTCATT CATTTTCAGC TGGCTCTGTT
5650 |
var(5612):[G:0.15]
CCCTTAAGCC AGGGGATTTT CGTTTGTTTG TTTCCCCTTC AAGGAAATGA
5700
TTCTAGCTAC AGTTTTGATT TCCTTGTACA ACTGTTTTCA GTAGCACAGG
5750
GAAAGAAAAC ATCGAAAGCA TTCACCACCT CATTTGTGTG CTGGGGGAAA
5800
AAGCAGAAAT GTGTATTCTC TTTTTTTGTT TCGATGACCT TGTTCCTGAC
5850
TTGTTACTCG TGACTTGAGA GATCAGAGGG CTAGAGGACT AGAATTTATA
5900
GAGGTG
T
T
T
T
T
T
T
T
G
T
T
T
G
T
T
T
A
T
T
T
T
T
G
T
T
C
G
A
G
T
T
G
C
C
C
A
G
G
C
T
G
G
A
G
5950 |
REPEAT
T
G
C
A
G
T
G
G
C
G
C
A
A
T
C
T
C
G
G
C
T
C
A
C
T
G
C
A
A
C
C
T
C
T
G
C
C
T
C
C
C
A
G
G
T
T
C
A
A
G
6000 |
var(5959):[T:0.03]
C
G
A
T
T
C
T
T
C
G
G
C
C
T
C
A
G
C
C
T
C
C
T
G
A
G
T
A
G
C
T
G
G
A
A
C
T
A
C
A
G
G
C
G
C
C
C
G
C
C
6050
A
C
C
A
C
A
C
C
C
A
G
C
T
A
A
T
T
T
T
T
G
T
A
T
T
T
T
T
C
A
G
T
A
G
A
G
A
T
G
G
G
A
T
T
T
C
A
C
C
A
6100
T
A
T
T
G
G
T
C
A
A
G
C
T
G
G
C
C
T
C
G
A
A
C
T
C
C
T
G
A
C
C
T
C
G
T
G
A
T
C
C
A
C
C
C
G
C
C
T
C
A
6150
G
T
T
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
G
T
A
C
A
G
G
C
G
T
G
A
G
C
C
G
C
C
G
T
G
C
C
C
G
G
C
C
TTT
6200
TTGTGTTTTT GTGTTTTTGA GAGGAGCTCA TTGCTTTTTA GGCTTCCCTA
6250
G
C
GTGAGAAA ATCTGGGGAT CCATGCTCTA G
T
T
T
A
C
T
T
C
C
T
T
T
T
T
T
T
T
T
T
6300 |
var(6252):[T:0.01]
|
REPEAT
T
T
T
T
T
T
T
G
A
G
A
T
G
G
A
G
T
C
T
C
G
C
T
T
A
G
A
T
T
G
C
C
T
A
A
T
C
T
C
A
G
C
T
C
A
T
T
G
C
A
6350
A
C
T
T
C
T
G
C
C
T
C
C
G
G
G
G
T
T
C
A
A
G
G
G
A
T
T
C
T
C
G
T
G
T
C
T
C
A
G
C
C
T
C
C
T
G
G
G
T
A
6400
G
C
T
A
G
G
A
T
A
C
G
G
G
C
A
C
C
C
G
C
T
A
C
C
A
T
G
C
C
T
G
G
C
T
A
A
T
T
T
T
G
T
A
C
T
T
T
T
A
G
6450 |
var(6411):[A:0.01]
T
A
G
A
G
A
C
A
G
G
G
T
T
T
C
G
C
C
A
C
G
T
T
G
G
C
C
A
G
G
C
T
G
G
T
C
T
C
G
A
A
C
T
C
C
T
G
A
C
C
6500
T
C
A
G
G
T
G
A
G
C
C
G
C
C
T
G
C
C
T
T
G
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
A
G
A
T
T
A
C
A
G
G
C
G
T
6550 |
var(6548):[T:0.06]
G
A
G
C
C
A
C
C
G
C
G
C
T
T
G
G
C
C
TA ATTTGCTTTT CCTGAAATTC AAATGGTCTA
6600
ATATGAAAAA CGCCAACCTT GCTTGAAAGA ATAAGAAAGA GGTGCGGTTT
6650
CGTTGGGCCG TTGATGTTTG GAACAGGACT GGTTTTGTCC CCTTGCTCGG
6700
AAAGGGCAGC AACTGTGAGG ACAGCTCCCT GACGTGCTCT CACTCAGCAC
6750
TGTTCCGTTC CTGAGCACTG TCCCCACTAG CTAGGCCAAG GGAGCTCATT
6800
TGGCAGGCAA CTGCTGTCTG GCTG
C
GCCTG TGGCAGTAAA ATCTGCC
T
T
T
6850 |
var(6825):[T:0.04]
|
REPEAT
A
T
T
T
T
T
T
G
G
A
G
G
C
A
G
G
G
T
C
T
T
G
C
C
C
T
G
T
C
G
C
T
C
A
G
G
C
T
G
A
A
G
T
G
T
G
C
A
G
T
6900
T
A
T
A
G
C
T
C
A
C
T
G
C
A
G
C
C
T
C
C
A
G
C
T
T
C
T
G
T
A
C
T
C
A
A
C
T
G
A
T
C
C
T
C
C
T
C
T
C
T
6950
C
A
G
C
C
T
C
C
T
G
A
G
T
A
G
C
T
G
G
G
A
C
T
A
T
A
C
G
C
A
C
G
T
G
T
T
A
C
C
A
C
T
C
C
C
ACCTC
7000
AG
T
T
T
G
T
T
T
G
T
T
T
A
T
T
T
A
T
T
T
A
T
T
T
A
T
T
T
A
T
T
T
A
T
T
G
A
G
A
T
G
G
A
G
T
T
T
T
G
7050 |
REPEAT
|
var(7014):[G:0.01]
C
T
C
T
T
G
C
T
G
C
C
C
A
G
G
C
T
G
G
A
G
T
G
C
A
A
T
G
G
C
G
C
G
A
T
C
T
C
G
G
C
T
C
A
C
C
G
C
A
A
7100
C
C
T
C
C
A
C
C
T
C
C
T
G
G
T
T
C
A
A
G
C
G
A
T
T
C
T
C
C
T
G
C
C
T
C
A
G
C
C
T
C
C
T
G
A
G
T
A
G
C
7150
T
G
G
G
A
T
T
A
C
A
G
G
C
A
T
G
C
A
C
C
A
C
C
A
C
G
C
C
C
G
G
C
T
A
A
T
T
T
T
G
T
A
T
T
T
T
T
C
G
T
7200 |
var(7180):[A:0.07]
|
var(7198):[A:0.01]
A
G
A
G
A
T
G
G
G
G
T
T
T
C
T
C
C
A
C
A
T
T
G
G
T
T
C
A
G
G
C
T
G
T
T
C
T
C
G
A
A
C
T
C
C
C
A
A
C
C
7250
T
C
A
G
G
T
G
A
T
C
C
A
C
C
C
G
C
C
T
C
A
G
C
C
T
C
C
C
A
A
A
G
T
G
C
T
G
G
G
A
T
T
A
T
A
G
G
C
G
T
7300
G
A
G
C
C
C
C
C
G
A
A
C
C
C
G
G
C
C
AC TCCCAGCTAA GTTTAAATTT
T
T
T
G
T
T
T
G
T
T
7350 |
REPEAT
T
G
T
T
C
G
T
T
T
G
T
T
T
T
T
A
T
T
T
T
T
T
G
A
G
A
C
A
G
A
G
T
C
T
C
C
C
G
C
C
C
A
G
G
C
T
G
G
A
G
7400 |
var(7359):[C:0.01]
|
var(7378):[G:0.01]
C
G
C
A
G
A
T
C
A
C
T
G
C
A
T
C
C
T
T
G
A
C
C
T
C
C
C
A
G
G
C
T
T
A
A
G
C
C
A
T
C
C
T
C
C
C
C
A
C
T
7450
C
A
G
C
C
T
C
C
C
A
A
G
T
A
G
C
T
G
G
G
A
T
T
A