Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop 000163 T 1 0 1 C 45 44 89 000172 A 1 0 1 C 47 44 91 000385 T 8 9 17 C 40 35 75 000689 T 1 0 1 C 43 44 87 000700 C 10 6 16 T 30 36 66 000881 A 6 0 6 C 38 42 80 000953 G 0 2 2 T 48 40 88 000978 A 1 5 6 G 47 37 84 001141 T 1 0 1 C 47 44 91 001497 T 1 0 1 C 47 44 91 001694 A 1 0 1 G 47 46 93 001733 T 1 0 1 C 47 46 93 002155 T 1 0 1 G 47 46 93 002206 T 1 0 1 C 47 36 83 002507 A 1 0 1 C 47 44 91 002673 G 1 0 1 C 39 42 81 002777 T 1 0 1 C 41 40 81 002951 C 1 0 1 T 39 36 75 003004 T 0 5 5 C 42 31 73 004504 T 4 7 11 G 40 35 75 004658 A 1 0 1 T 45 46 91 004714 C 2 0 2 G 44 46 90 004767 A 2 0 2 G 46 46 92 005237 T 1 0 1 C 47 38 85 005612 G 14 0 14 A 34 46 80 005959 T 3 0 3 C 45 44 89 006252 T 1 0 1 C 47 44 91 006411 A 1 0 1 G 47 36 83 006548 T 5 0 5 C 41 32 73 006825 T 2 2 4 C 46 44 90 007014 G 1 0 1 A 47 46 93 007180 A 6 0 6 G 40 36 76 007198 A 1 0 1 C 47 40 87 007359 C 1 0 1 T 43 44 87 007378 G 0 1 1 A 48 45 93 007555 A 1 0 1 G 47 46 93 008173 A 29 13 42 G 19 33 52 008238 T 0 2 2 C 48 44 92 008522 A 1 0 1 G 47 46 93 008622 T 1 0 1 C 47 46 93 008728 * 008773 G 2 23 25 A 46 23 69 008927 C 1 8 9 T 47 38 85 009059 A 0 1 1 G 48 45 93 009167 A 1 8 9 G 47 38 85 010595 T 1 1 2 C 47 43 90 011773 A 1 3 4 G 41 27 68 012354 T 1 0 1 C 39 40 79 012451 C 1 7 8 G 43 29 72 012511 A 1 7 8 G 37 29 66 012583 T 1 0 1 C 45 36 81 013109 T 1 7 8 C 45 35 80 013274 A 7 4 11 G 41 40 81 013362 A 0 1 1 G 48 43 91 013377 T 1 0 1 C 47 44 91 014085 T 3 0 3 C 45 40 85 015234 A 1 0 1 G 47 42 89 015368 C 1 0 1 T 47 42 89 015864 A 2 0 2 G 46 46 92 015954 A 0 1 1 G 48 45 93 016375 T 1 0 1 C 47 38 85 016728 G 27 12 39 T 21 34 55 016780 C 1 0 1 T 47 46 93 016819 T 1 0 1 C 47 46 93 017070 T 1 0 1 C 47 44 91 017534 C 1 0 1 A 45 34 79 017590 T 1 0 1 C 47 34 81 018041 C 9 0 9 T 35 34 69 018560 A 1 0 1 G 43 44 87 018812 G 19 17 36 A 23 23 46 018860 T 0 1 1 C 42 37 79 018895 G 7 0 7 A 35 40 75 018963 C 1 0 1 T 43 42 85 019077 A 0 2 2 G 48 42 90 020394 T 1 0 1 C 47 46 93 020908 T 4 24 28 C 40 20 60 021181 - 8 11 19 + 38 19 57 021246 T 4 0 4 C 38 42 80 021766 A 1 0 1 G 45 40 85 023754 G 8 0 8 T 38 44 82 024879 A 7 0 7 G 37 46 83 025184 C 0 4 4 T 48 42 90 025185 A 0 4 4 G 48 42 90 026355 T 8 0 8 C 40 46 86 026379 T 4 25 29 C 44 17 61 026463 A 10 15 25 G 34 27 61 026689 G 13 19 32 A 27 19 46 026790 G 2 1 3 A 38 37 75 026870 T 2 0 2 C 38 40 78 027130 A 8 0 8 G 36 44 80 027352 A 9 0 9 G 39 46 85 027543 G 5 2 7 C 43 44 87 027590 A 9 0 9 G 39 46 85 027713 T 6 22 28 G 42 24 66 027729 A 1 0 1 G 47 46 93 027750 T 2 0 2 C 46 46 92 028442 A 2 0 2 G 46 44 90 028455 T 1 0 1 C 47 44 91 028520 C 0 2 2 G 46 40 86 028730 T 3 2 5 G 43 44 87 028741 G 3 22 25 A 43 24 67 028748 A 0 1 1 C 46 45 91 028766 T 3 3 6 C 43 43 86 028817 C 1 0 1 A 31 40 71 028998 T 7 0 7 C 41 36 77 029142 T 20 3 23 C 28 39 67 029268 C 21 17 38 T 27 23 50 029295 T 18 3 21 C 30 37 67 029490 A 5 2 7 G 43 42 85 029524 G 5 22 27 C 43 22 65 029664 T 20 3 23 G 28 41 69 029678 A 8 17 25 C 40 23 63 029723 A 0 1 1 G 48 39 87 030337 A 17 4 21 C 31 42 73 030981 T 12 20 32 C 36 24 60 031063 A 17 4 21 G 31 42 73 031110 A 3 0 3 G 45 46 91 031151 A 1 0 1 G 47 46 93 031163 A 12 22 34 C 36 24 60 031416 G 5 22 27 A 43 24 67 031425 A 3 0 3 G 45 46 91 031722 C 7 1 8 T 41 45 86 031775 C 12 22 34 T 36 24 60 033079 C 24 10 34 T 24 34 58 035876 C 4 14 18 G 44 32 76 036139 A 9 7 16 G 39 35 74 036308 C 0 1 1 G 48 45 93 036314 A 2 0 2 G 46 46 92 036525 T 3 0 3 C 45 40 85 036789 A 18 21 39 G 28 23 51 037288 T 2 15 17 C 34 31 65 037453 A 1 1 2 T 29 23 52 037535 A 6 0 6 G 38 44 82 037702 T 3 15 18 C 45 29 74 037703 A 4 5 9 G 44 41 85 037828 A 1 0 1 C 45 46 91 038378 A 5 22 27 C 43 22 65 038576 A 16 21 37 G 24 21 45 038609 T 1 1 2 C 41 43 84 038879 T 1 0 1 C 45 44 89 038904 G 0 1 1 C 44 43 87 039002 C 11 13 24 T 23 25 48 039203 C 7 0 7 T 39 40 79 039467 A 4 15 19 G 40 31 71 039494 C 17 16 33 T 31 30 61 039522 A 12 1 13 T 36 45 81 039655 G 1 0 1 A 47 46 93 039970 A 19 9 28 G 29 37 66 040062 G 4 6 10 C 44 40 84 040174 T 1 0 1 C 47 38 85 040438 C 28 10 38 G 20 36 56 040527 A 5 0 5 G 43 46 89 040598 A 5 15 20 G 43 31 74 040672 A 22 24 46 C 26 22 48 040691 G 6 21 27 A 42 25 67 040747 A 8 3 11 G 40 43 83 040812 A 1 0 1 G 47 46 93 041381 - 12 0 12 + 36 28 64 041817 A 11 1 12 G 31 43 74 042252 A 5 15 20 G 43 31 74 043627 A 1 6 7 G 47 38 85 044009 A 5 14 19 G 43 32 75 044076 A 5 14 19 G 43 32 75 044103 A 10 1 11 G 38 45 83 044114 G 10 22 32 A 38 24 62 044240 A 2 0 2 G 44 46 90 044243 A 5 14 19 G 41 32 73 044332 A 5 1 6 G 41 45 86 044414 A 2 0 2 G 44 42 86 044506 G 14 2 16 C 28 38 66 044529 A 0 1 1 G 42 39 81 044695 A 9 12 21 G 31 28 59 044857 T 19 9 28 C 19 31 50 044908 A 3 0 3 G 37 46 83 044964 G 4 14 18 A 36 32 68 044994 T 0 1 1 C 40 45 85 045098 G 2 0 2 C 38 46 84 045173 C 7 0 7 G 33 46 79 045359 A 5 14 19 G 43 32 75 045364 C 1 0 1 G 47 46 93 045577 T 5 0 5 C 37 34 71 045622 T 4 7 11 C 40 39 79 045645 G 6 14 20 A 38 30 68 045702 C 5 11 16 T 43 35 78 045792 T 5 13 18 G 43 33 76 045935 T 5 21 26 C 43 25 68 046402 + 13 12 25 - 25 26 51 046410 C 1 0 1 T 47 46 93 046728 T 2 0 2 C 46 46 92 046731 T 0 1 1 G 48 45 93 047669 G 7 11 18 A 29 25 54 047774 C 4 0 4 A 40 42 82 047804 A 5 12 17 T 43 30 73 047908 A 13 5 18 G 35 39 74 047911 T 8 0 8 C 40 44 84 047971 C 7 13 20 T 41 31 72 048014 A 8 14 22 C 38 30 68 048039 G 13 5 18 C 31 37 68 Note: AD: African_Descent ED: European_Descent Total: All_population pop : population Diallelic insertion/deletion polymorphisms are represented as: + : insertion allele - : deletion allele The + (inserted) allele for each site is listed below: 021181: GTT 041381: C 046402: ta Tri-allelic sites: Site Allele1 AD-pop ED-pop Total-pop Allele2 AD-pop ED-pop Total-pop Allele3 AD-pop ED-pop Total-pop 008728 C 1 0 1 A 18 13 31 T 29 33 62